Method Profile

Paired Liver Tumor and Nontumor Organoids for Idarubicin Response

Compare idarubicin sensitivity in paired liver cultures and examine its association with TACE outcomes.

LiverOrganoids
Hepatocellular carcinoma tissue with pink cellular cords and pale spaces.
Hepatocellular carcinoma tissue. (Ed Uthman, CC BY 2.0)

Research Applications

Exploratory drug-response and clinical-association assessment for liver-directed idarubicin treatment.

Model & Design

Biopsy-derived HCC and adjacent nontumor liver organoids from the single-center TACTida trial: 17 tumor and 25 nontumor cultures were established.

Experimental Format

Six-day organoid growth followed by 24-hour idarubicin exposure. Doxorubicin, cell-death, expression and secretion measurements were separate follow-up experiments.

Model Components

  • Component

    Biological models

    Description

    65 biopsies yielded 42 cultures. Tumor organoids were obtained for 15 of 28 patients and nontumor organoids for 20 of 28.

  • Component

    Drug-response readouts

    Description

    Idarubicin 0–100 μM with CellTiter-Glo 3D ATP measurement; doxorubicin 0–500 μM. Live/dead, qPCR and AFP/TGF-β1 ELISA were separate assays.

Measurements & Endpoints

  • ATP-based viability and IC50
  • Live/dead staining
  • Stress-response and proliferation-associated transcripts
  • AFP and TGF-β1 secretion
  • Necrosis and mRECIST clinical response

Analysis

Fit dose-response curves separately for tumor and nontumor cultures; compare matched culture sensitivity and test tumor IC50 against post-TACE response variables.

Published Evidence

  • Study Design

    Paired tumor/nontumor pharmacology and exploratory clinical association.

    Study Sample

    17 paired culture comparisons. The Results describe a doxorubicin comparison for 8 patients; qPCR used 7 patients and secretion analysis used 6.

    Comparison

    Nontumor liver organoids; doxorubicin; untreated organoids; clinical necrosis and mRECIST outcomes.

    Finding

    Idarubicin sensitivity varied widely. Tumor cultures were more sensitive in 7 comparisons, nontumor cultures in 7 and comparable in 3. Tumor IC50 was not significantly associated with TACE response.

    Interpretation & Limits
    • A 24-hour spatially uniform exposure does not reproduce embolization, ischemia or heterogeneous local drug retention.
    • Culture establishment was incomplete and may select tumor subpopulations.
    • The clinical association comes from a small exploratory cohort with incomplete culture establishment.

Sources

  1. Characterization of hepatocellular carcinoma patient-derived organoids from patients receiving transarterial chemoembolization as a model for preclinical drug response assessment. Scientific Reports. 2026-08-04. DOI: 10.1038/s41598-026-65418-3 ↗